Correlations in suspensions of swimming microorganisms: theory and simulation
Patrick T. Underhill
Dept. of Chemical & Biological Engineering, Rensselaer Polytechnic Institute
    The motion of single swimming microorganisms, including different methods of
propulsion and responses to the environment such as chemical gradients, has
been studied for many years. However, much less work has examined
populations. Large collections of swimming microorganisms are able to
produce collective motions on a scale much larger than the scale of a single
organism. In particular, the collective behavior leads to velocities larger
than that of an isolated organism, fluid structures larger than the size of
an organism, enhanced transport in the fluid, and enhanced stress
fluctuations which produce altered rheological properties. We show
theoretically how these phenomena are linked to the interactions between the
organisms and compare the predictions with the results from computer
simulations. In this way we can understand how the behavior scales with
concentration, the importance of the method of swimming used, the influence
of run-and-tumble like motions of the organisms, and how the interactions
can lead to large-scale fluid structures. In periodic geometries, the
large-scale fluid structures lead to simulation results that depend on the
simulation box size. This result is in stark contrast with results from
confined systems. The additional length scale (screening length) introduced
by the confinement seems to prevent these large-scale structures from
forming.